Transcript: ENSDART00000022163.9 exoc6-201

Description

exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]

Gene Synonyms

zgc:77548

Location

Chromosome 12: 8,996,035-9,087,566 reverse strand.

About this transcript

This transcript has 19 exons, is associated with 2123 variant alleles and maps to 186 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020521.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000125230.3	exoc6-202	3798	801aa	ENSDARP00000112410.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152793.2	exoc6-205	805	257aa	ENSDARP00000126777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152733.2	exoc6-204	354	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000022163.9	exoc6-201	3767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000152630.2	exoc6-203	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 19, Coding exons: 0, Transcript length: 3,767 bps,

Version

ENSDART00000022163.9

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000022163.9 exoc6-201

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Transcript: ENSDART00000022163.9 exoc6-201

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