Transcript: ENSDART00000021788.9 pbk-201

Description

PDZ binding kinase [Source:ZFIN;Acc:ZDB-GENE-030523-2]

Gene Synonyms

PDZ-binding kinase, topk, zgc:92050

Location

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 286 variant alleles and maps to 205 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000021788.9	pbk-201	1702	339aa	ENSDARP00000013651.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180784.1	pbk-203	1958	339aa	ENSDARP00000153524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHU8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136476.2	pbk-202	745	201aa	ENSDARP00000114079.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,702 bps, Translation length: 339 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DHU8

Version

ENSDART00000021788.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.