Transcript: ENSDART00000021286.9 si:dkey-46g23.5-201

Description

si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]

Location

About this transcript

This transcript has 18 exons, is annotated with 19 domains and features, is associated with 9 variant alleles and maps to 155 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078886.6	si:dkey-46g23.5-202	4813	1482aa	ENSDARP00000073345.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QS86	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000021286.9	si:dkey-46g23.5-201	2281	747aa	ENSDARP00000008576.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,281 bps, Translation length: 747 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000021286.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.