Transcript: ENSDART00000020550.6 ube2e3-201

Description

ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-408]

Gene Synonyms

wu:fb26h04, zgc:76906

Location

Chromosome 9: 43,797,902-43,880,326 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 1255 variant alleles and maps to 367 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000012244.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020550.6	ube2e3-201	1677	209aa	ENSDARP00000010840.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6A7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186240.1	ube2e3-204	4271	209aa	ENSDARP00000149158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6A7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136628.2	ube2e3-202	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000138549.2	ube2e3-203	682	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,677 bps, Translation length: 209 residues

Version

ENSDART00000020550.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000020550.6 ube2e3-201

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Transcript: ENSDART00000020550.6 ube2e3-201

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