Transcript: ENSDART00000020506.9 snx14-201

Description

sorting nexin 14 [Source:NCBI gene (formerly Entrezgene);Acc:555970]

Location

Chromosome 20: 861,819-874,807 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 638 variant alleles and maps to 41 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000006332.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142361.4	snx14-204	3234	934aa	ENSDARP00000119620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PNP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000104725.5	snx14-202	3240	936aa	ENSDARP00000095495.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIC3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000020506.9	snx14-201	793	264aa	ENSDARP00000015158.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000141333.2	snx14-203	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 793 bps, Translation length: 264 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000020506.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000020506.9 snx14-201

Summary

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Transcript: ENSDART00000020506.9 snx14-201

Summary

About Us

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