Transcript: ENSDART00000020296.7 l1cama-201

Description

L1 cell adhesion molecule, paralog a [Source:ZFIN;Acc:ZDB-GENE-990415-10]

Gene Synonyms

L1.2, nadl1.2, sb:eu320, sb:eu917, wu:fq26g05

Location

About this transcript

This transcript has 29 exons, is annotated with 83 domains and features, is associated with 566 variant alleles and maps to 189 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020296.7	l1cama-201	4119	1271aa	ENSDARP00000005473.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9X3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189096.1	l1cama-202	3970	1271aa	ENSDARP00000154803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9X3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 4,119 bps, Translation length: 1,271 residues

Version

ENSDART00000020296.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.