Transcript: ENSDART00000020136.8 ivns1abpb-201

Description

influenza virus NS1A binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6266]

Gene Synonyms

fi13f08, fi41c09, wu:fi13f08, wu:fi41c09

Location

About this transcript

This transcript has 15 exons, is annotated with 31 domains and features, is associated with 86 variant alleles and maps to 166 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000020136.8	ivns1abpb-201	2973	640aa	ENSDARP00000002476.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159048.3	ivns1abpb-202	2660	614aa	ENSDARP00000141741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000163384.2	ivns1abpb-204	823	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000160443.2	ivns1abpb-203	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 2,973 bps, Translation length: 640 residues

Version

ENSDART00000020136.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.