Transcript: ENSDART00000020135.9 pex19-201

Description

peroxisomal biosis factor 19 [Source:ZFIN;Acc:ZDB-GENE-050417-424]

Gene Synonyms

pxf, wu:fb40d12, wu:fc41h09, zgc:110675

Location

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 293 variant alleles and maps to 201 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000045016.8	pex19-202	1692	288aa	ENSDARP00000045015.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000020135.9	pex19-201	2110	300aa	ENSDARP00000025585.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000142940.2	pex19-203	462	143aa	ENSDARP00000122510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146409.2	pex19-204	692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,110 bps, Translation length: 300 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000020135.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.