Transcript: ENSDART00000020084.10 HSP90AB1-201

Description

heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]

Location

Chromosome 20: 51,197,758-51,211,840 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 34 domains and features, is associated with 456 variant alleles and maps to 252 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000029150.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020084.10	HSP90AB1-201	3386	725aa	ENSDARP00000014978.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O57521	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169321.3	HSP90AB1-204	4561	725aa	ENSDARP00000137112.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O57521	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130572.3	HSP90AB1-202	641	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000153452.2	HSP90AB1-203	511	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,386 bps, Translation length: 725 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O57521

Version

ENSDART00000020084.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000020084.10 HSP90AB1-201

Summary

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Transcript: ENSDART00000020084.10 HSP90AB1-201

Summary

About Us

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