Transcript: ENSDART00000020044.9 shpk-201

Description

sedoheptulokinase [Source:ZFIN;Acc:ZDB-GENE-060526-357]

Gene Synonyms

carkl, si:dkey-9e15.3

Location

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 329 variant alleles and maps to 151 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156372.3	shpk-202	1410	469aa	ENSDARP00000129532.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WH23	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000020044.9	shpk-201	1460	454aa	ENSDARP00000027634.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,460 bps, Translation length: 454 residues

Version

ENSDART00000020044.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.