Transcript: ENSDART00000020033.8 xrcc1-201

Description

X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]

Location

About this transcript

This transcript has 18 exons, is annotated with 32 domains and features, is associated with 8 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020033.8	xrcc1-201	2797	617aa	ENSDARP00000023168.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXI2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172622.2	xrcc1-202	4759	617aa	ENSDARP00000131012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXI2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 2,797 bps, Translation length: 617 residues

Version

ENSDART00000020033.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.