Transcript: ENSDART00000019165.8 apaf1-201

Description

apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]

Gene Synonyms

zgc:136543

Location

About this transcript

This transcript has 27 exons, is annotated with 71 domains and features, is associated with 937 variant alleles and maps to 284 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000019165.8	apaf1-201	4533	1261aa	ENSDARP00000008347.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BC28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000113507.3	apaf1-202	2008	465aa	ENSDARP00000097917.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139115.2	apaf1-203	647	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 27, Coding exons: 26, Transcript length: 4,533 bps, Translation length: 1,261 residues

Version

ENSDART00000019165.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.