Transcript: ENSDART00000018977.7 RABGEF1-203

Description

RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]

Location

Chromosome 10: 32,854,901-32,877,348 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 23 domains and features, is associated with 874 variant alleles and maps to 200 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014430.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000018977.7	RABGEF1-203	5252	502aa	ENSDARP00000016779.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P6Y4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138243.3	RABGEF1-202	3279	502aa	ENSDARP00000112905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P6Y4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133421.2	RABGEF1-201	634	212aa	ENSDARP00000120214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 5,252 bps, Translation length: 502 residues

Version

ENSDART00000018977.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000018977.7 RABGEF1-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000018977.7 RABGEF1-203

Summary

About Us

Get help

Our sister sites

Follow us