Transcript: ENSDART00000018676.7 cyp3c1-201

Description

cytochrome P450, family 3, subfamily c, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3060]

Location

Chromosome 3: 40,969,242-40,976,582 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 25 domains and features, is associated with 382 variant alleles and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000015575.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000018676.7	cyp3c1-201	1931	505aa	ENSDARP00000009507.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193553.1	cyp3c1-204	1741	505aa	ENSDARP00000156779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000128450.3	cyp3c1-202	617	130aa	ENSDARP00000105001.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136174.2	cyp3c1-203	530	91aa	ENSDARP00000122647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 1,931 bps, Translation length: 505 residues

Version

ENSDART00000018676.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000018676.7 cyp3c1-201

Summary

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Transcript: ENSDART00000018676.7 cyp3c1-201

Summary

About Us

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