Transcript: ENSDART00000018640.11 snx3-201

Description

sorting nexin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-921]

Gene Synonyms

wu:fb53a08, zgc:123189

Location

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 341 variant alleles and maps to 225 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000018640.11	snx3-201	1294	162aa	ENSDARP00000012094.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3B7E7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137910.2	snx3-203	876	128aa	ENSDARP00000116530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134312.2	snx3-202	770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,294 bps, Translation length: 162 residues

Version

ENSDART00000018640.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.