Transcript: ENSDART00000018469.10 NPNT-201

Description

nephronectin a [Source:ZFIN;Acc:ZDB-GENE-090312-201]

Location

About this transcript

This transcript has 13 exons, is annotated with 52 domains and features, is associated with 1145 variant alleles and maps to 135 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000018469.10	NPNT-201	2441	605aa	ENSDARP00000020901.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5G4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158988.2	NPNT-204	1907	633aa	ENSDARP00000139806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000165973.2	NPNT-205	1856	616aa	ENSDARP00000132626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134988.2	NPNT-202	431	87aa	ENSDARP00000122290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135780.2	NPNT-203	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,441 bps, Translation length: 605 residues

Version

ENSDART00000018469.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.