Transcript: ENSDART00000017968.9 sirt4-201

Description

sirtuin 4 [Source:ZFIN;Acc:ZDB-GENE-041010-65]

Gene Synonyms

im:7139453, zgc:103539

Location

Chromosome 6: 40,877,394-40,884,453 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 214 variant alleles and maps to 165 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000010415.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000017968.9	sirt4-201	1510	310aa	ENSDARP00000027611.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QHM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189857.1	sirt4-204	1891	310aa	ENSDARP00000150685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QHM6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181706.1	sirt4-203	949	310aa	ENSDARP00000151571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QHM6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154100.2	sirt4-202	934	273aa	ENSDARP00000127911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,510 bps, Translation length: 310 residues

Version

ENSDART00000017968.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000017968.9 sirt4-201

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Transcript: ENSDART00000017968.9 sirt4-201

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