Transcript: ENSDART00000017869.10 thrb-201

Description

thyroid hormone receptor beta [Source:ZFIN;Acc:ZDB-GENE-990415-268]

Gene Synonyms

NR1A2, TR[b]1, fj24f03, thr2, trb, wu:fj24f03

Location

Chromosome 19: 17,518,061-17,658,173 reverse strand.

About this transcript

This transcript has 11 exons, is associated with 644 variant alleles and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000021163.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189391.1	thrb-210	5629	508aa	ENSDARP00000152808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QK91	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186678.1	thrb-207	5822	395aa	ENSDARP00000149633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9PVE4-1	-
ENSDART00000188045.1	thrb-208	5804	395aa	ENSDARP00000150484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9PVE4-1	-
ENSDART00000188589.1	thrb-209	5795	386aa	ENSDARP00000152213.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TCT8	-
ENSDART00000176980.2	thrb-206	5732	386aa	ENSDARP00000144469.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TCT8	-
ENSDART00000166313.2	thrb-204	5600	386aa	ENSDARP00000131464.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TCT8	-
ENSDART00000151766.3	thrb-203	3136	395aa	ENSDARP00000126275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9PVE4-1	-
ENSDART00000170790.2	thrb-205	2198	386aa	ENSDARP00000137456.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TCT8	-
ENSDART00000017869.10	thrb-201	1992	122aa	ENSDARP00000022899.8	Nonsense mediated decay	-	-
ENSDART00000142170.2	thrb-202	1234	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 11, Coding exons: 5, Transcript length: 1,992 bps, Translation length: 122 residues

Version

ENSDART00000017869.10

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000017869.10 thrb-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000017869.10 thrb-201

Summary

About Us

Get help

Our sister sites

Follow us