Transcript: ENSDART00000017850.9 ctu1-201

Description

cytosolic thiouridylase subunit 1 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-704]

Gene Synonyms

zgc:55395

Location

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 430 variant alleles and maps to 152 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000017850.9	ctu1-201	1583	343aa	ENSDARP00000009303.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GNZ1 Q803X1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164426.2	ctu1-202	1045	343aa	ENSDARP00000134794.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GNZ1 Q803X1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,583 bps, Translation length: 343 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q803X1

Version

ENSDART00000017850.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.