Transcript: ENSDART00000017393.9 traip-201

Description

TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]

Gene Synonyms

zgc:100878

Location

About this transcript

This transcript has 16 exons, is annotated with 16 domains and features, is associated with 373 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000017393.9	traip-201	2096	453aa	ENSDARP00000024931.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192896.1	traip-202	2942	453aa	ENSDARP00000152415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL47	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,096 bps, Translation length: 453 residues

Version

ENSDART00000017393.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.