Transcript: ENSDART00000017309.11 ca16b-201

Description

carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]

Gene Synonyms

wu:fb17c03, zCA16b

Location

Chromosome 6: 45,951,893-46,162,585 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 52 domains and features, is associated with 2839 variant alleles and maps to 222 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000060123.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000017309.11	ca16b-201	5305	1382aa	ENSDARP00000002722.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000169722.2	ca16b-204	3741	1246aa	ENSDARP00000137770.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4INH6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000154392.2	ca16b-203	632	211aa	ENSDARP00000128049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WCV2	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000153489.2	ca16b-202	1123	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 5,305 bps, Translation length: 1,382 residues

Version

ENSDART00000017309.11

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000017309.11 ca16b-201

Summary

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Transcript: ENSDART00000017309.11 ca16b-201

Summary

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