Transcript: ENSDART00000017229.9 NCAM1-205

Description

neural cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-990415-31]

Location

Chromosome 21: 23,338,059-23,746,916 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 63 domains and features, is associated with 5044 variant alleles and maps to 375 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000056181.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000157454.2	NCAM1-207	2840	898aa	ENSDARP00000130606.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000017229.9	NCAM1-205	2921	837aa	ENSDARP00000017613.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DH85	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000156658.3	NCAM1-206	2810	888aa	ENSDARP00000128320.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000101117.5	NCAM1-201	878	288aa	ENSDARP00000091892.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132570.2	NCAM1-204	903	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000143661.2	NCAM1-202	665	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000145469.2	NCAM1-203	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,921 bps, Translation length: 837 residues

Version

ENSDART00000017229.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000017229.9 NCAM1-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000017229.9 NCAM1-205

Summary

About Us

Get help

Our sister sites

Follow us