Transcript: ENSDART00000016417.9 atp5mc3a-201

Description

ATP synthase membrane subunit c locus 3a [Source:ZFIN;Acc:ZDB-GENE-040426-857]

Gene Synonyms

atp5g3, atp5g3a, zgc:55970, zgc:86872

Location

About this transcript

This transcript has 5 exons, is annotated with 22 domains and features, is associated with 265 variant alleles and maps to 216 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000016417.9	atp5mc3a-201	1322	139aa	ENSDARP00000015997.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZYW7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123340.3	atp5mc3a-202	850	139aa	ENSDARP00000106777.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZYW7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130645.3	atp5mc3a-203	840	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,322 bps, Translation length: 139 residues

Version

ENSDART00000016417.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.