Transcript: ENSDART00000016121.8 eef1a1a-201

Description

eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]

Gene Synonyms

fj64c02, wu:fj64c02, zgc:73138

Location

Chromosome 13: 27,316,632-27,317,730 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 118 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000039502.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128726.4	eef1a1a-202	2170	462aa	ENSDARP00000104468.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P969	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164533.2	eef1a1a-204	3211	462aa	ENSDARP00000133540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P969	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000016121.8	eef1a1a-201	923	207aa	ENSDARP00000002751.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139595.2	eef1a1a-203	491	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 923 bps, Translation length: 207 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000016121.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000016121.8 eef1a1a-201

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Transcript: ENSDART00000016121.8 eef1a1a-201

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