Transcript: ENSDART00000016090.7 pla2g7-201

Description

phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:ZFIN;Acc:ZDB-GENE-040426-2248]

Gene Synonyms

zgc:77563

Location

About this transcript

This transcript has 11 exons, is annotated with 7 domains and features, is associated with 236 variant alleles and maps to 151 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000016090.7	pla2g7-201	2602	444aa	ENSDARP00000023547.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHM0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152993.2	pla2g7-202	721	214aa	ENSDARP00000127188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAC2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153402.2	pla2g7-203	493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,602 bps, Translation length: 444 residues

Version

ENSDART00000016090.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.