Transcript: ENSDART00000016075.8 nup37-201

Description

nucleoporin 37 [Source:ZFIN;Acc:ZDB-GENE-040718-363]

Gene Synonyms

zgc:92259

Location

Chromosome 4: 17,327,704-17,370,410 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 11 domains and features, is associated with 589 variant alleles and maps to 139 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094191.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000183726.1	nup37-206	2802	326aa	ENSDARP00000150218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133160.3	nup37-202	1479	326aa	ENSDARP00000120939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000016075.8	nup37-201	1479	326aa	ENSDARP00000018434.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136299.2	nup37-204	1006	280aa	ENSDARP00000119270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133750.2	nup37-203	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000141050.2	nup37-205	446	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 1,479 bps, Translation length: 326 residues

Version

ENSDART00000016075.8

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000016075.8 nup37-201

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Transcript: ENSDART00000016075.8 nup37-201

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