Transcript: ENSDART00000015547.9 cldng-201

Description

claudin g [Source:ZFIN;Acc:ZDB-GENE-010328-7]

Gene Synonyms

cb214, cldn5l, zgc:136312, zgc:152655

Location

About this transcript

This transcript has 2 exons, is annotated with 26 domains and features, is associated with 22 variant alleles and maps to 227 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000015547.9	cldng-201	1075	209aa	ENSDARP00000015898.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GPD3 Q9YH90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142111.2	cldng-202	638	159aa	ENSDARP00000115881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000192758.1	cldng-203	637	209aa	ENSDARP00000153981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GPD3 Q9YH90	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,075 bps, Translation length: 209 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9YH90

Version

ENSDART00000015547.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.