Transcript: ENSDART00000015170.8 mtdhb-201

Description

metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]

Location

About this transcript

This transcript has 13 exons, is annotated with 24 domains and features, is associated with 387 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000015170.8	mtdhb-201	2226	525aa	ENSDARP00000016213.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QAS0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000075937.4	mtdhb-202	1364	414aa	ENSDARP00000070416.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,226 bps, Translation length: 525 residues

Version

ENSDART00000015170.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.