Transcript: ENSDART00000014232.8 znf330-201

Description

zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]

Gene Synonyms

hm:zeh1201, zgc:56308, zgc:86920

Location

Chromosome 1: 53,266,504-53,277,660 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 15 domains and features, is associated with 7 variant alleles and maps to 174 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020494.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014232.8	znf330-201	1916	320aa	ENSDARP00000006732.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6H7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150352.3	znf330-204	746	196aa	ENSDARP00000125454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WF23	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000131520.3	znf330-202	736	224aa	ENSDARP00000120996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6H6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000150579.2	znf330-205	458	137aa	ENSDARP00000125509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WF78	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143294.2	znf330-203	637	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,916 bps, Translation length: 320 residues

Version

ENSDART00000014232.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000014232.8 znf330-201

Summary

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Transcript: ENSDART00000014232.8 znf330-201

Summary

About Us

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