Transcript: ENSDART00000014166.6 jdp2b-201

Description

Jun dimerization protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-197]

Gene Synonyms

fk87c02, jdp2, wu:fk87c02, zgc:92851

Location

Chromosome 20: 46,586,678-46,594,691 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 16 domains and features, is associated with 247 variant alleles and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020133.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014166.6	jdp2b-201	1100	156aa	ENSDARP00000010866.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGM8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179266.2	jdp2b-204	1549	156aa	ENSDARP00000144615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGM8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153231.2	jdp2b-203	790	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000143530.2	jdp2b-202	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,100 bps, Translation length: 156 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DGM8

Version

ENSDART00000014166.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000014166.6 jdp2b-201

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Transcript: ENSDART00000014166.6 jdp2b-201

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