Transcript: ENSDART00000014036.11 optn-201

Description

optineurin [Source:NCBI gene;Acc:336159]

Gene Synonyms

si:ch211-240l19.3, wu:fj52f04, zgc:66386, zgc:77868

Location

About this transcript

This transcript has 14 exons, is annotated with 20 domains and features, is associated with 340 variant alleles and maps to 263 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014036.11	optn-201	2455	517aa	ENSDARP00000020714.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WUQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133616.2	optn-202	1614	314aa	ENSDARP00000116787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WUP9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,455 bps, Translation length: 517 residues

Version

ENSDART00000014036.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.