Transcript: ENSDART00000013865.10 SEH1L-203

Description

SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]

Location

About this transcript

This transcript has 9 exons, is annotated with 20 domains and features, is associated with 405 variant alleles and maps to 188 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000013865.10	SEH1L-203	2939	364aa	ENSDARP00000003173.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TGU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151214.2	SEH1L-201	933	237aa	ENSDARP00000125892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000151535.3	SEH1L-204	643	157aa	ENSDARP00000125785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151637.2	SEH1L-202	638	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,939 bps, Translation length: 364 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6TGU2

Version

ENSDART00000013865.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.