Transcript: ENSDART00000013745.6 cx39.9-201

Description

connexin 39.9 [Source:ZFIN;Acc:ZDB-GENE-040406-2]

Gene Synonyms

cx46l, zgc:110668

Location

About this transcript

This transcript has 2 exons, is annotated with 24 domains and features, is associated with 229 variant alleles and maps to 206 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000125161.3	cx39.9-202	1244	353aa	ENSDARP00000107852.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0X0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000013745.6	cx39.9-201	1239	353aa	ENSDARP00000111351.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0X0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,239 bps, Translation length: 353 residues

Version

ENSDART00000013745.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.