Transcript: ENSDART00000012820.8 snupn-201

Description

snurportin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3464]

Gene Synonyms

rnut1, wu:fc41a03, zgc:77819

Location

About this transcript

This transcript has 9 exons, is annotated with 17 domains and features, is associated with 14 variant alleles and maps to 187 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000012820.8	snupn-201	1525	365aa	ENSDARP00000016305.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P5J9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180616.1	snupn-203	5063	365aa	ENSDARP00000156718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P5J9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139606.2	snupn-202	783	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,525 bps, Translation length: 365 residues

Version

ENSDART00000012820.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.