Transcript: ENSDART00000012789.8 slc1a6-201

Description

solute carrier family 1 member 6 [Source:ZFIN;Acc:ZDB-GENE-071004-45]

Gene Synonyms

EAAT1C, EAAT4, glastc, zgc:171923

Location

About this transcript

This transcript has 10 exons, is annotated with 31 domains and features, is associated with 744 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000012789.8	slc1a6-201	2095	560aa	ENSDARP00000017590.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D7RVS3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000178367.2	slc1a6-202	1699	560aa	ENSDARP00000143703.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D7RVS3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,095 bps, Translation length: 560 residues

Version

ENSDART00000012789.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.