Transcript: ENSDART00000012586.9 SLC31A1-202

Description

solute carrier family 31 member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3]

Gene Synonyms

ctr-1, ctr1, zgc:76839

Location

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 707 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149646.3	SLC31A1-201	4562	188aa	ENSDARP00000123985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000012586.9	SLC31A1-202	4560	188aa	ENSDARP00000015824.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKH1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 4,560 bps, Translation length: 188 residues

Version

ENSDART00000012586.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.