Transcript: ENSDART00000012470.7 HOXB4-202

Description

homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]

Location

About this transcript

This transcript has 2 exons, is annotated with 21 domains and features, is associated with 19 variant alleles and maps to 259 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000012470.7	HOXB4-202	1235	246aa	ENSDARP00000008458.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DHP6 P22574	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151584.2	HOXB4-201	529	105aa	ENSDARP00000125694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,235 bps, Translation length: 246 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P22574

Version

ENSDART00000012470.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.