Transcript: ENSDART00000012287.8 spire2-201

Description

spire-type actin nucleation factor 2 [Source:ZFIN;Acc:ZDB-GENE-041114-29]

Gene Synonyms

zgc:103506

Location

Chromosome 25: 34,887,999-34,900,293 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 584 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003084.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035245.8	spire2-202	3749	730aa	ENSDARP00000031129.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZ28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183561.1	spire2-205	2722	730aa	ENSDARP00000151864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZ28	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182506.1	spire2-204	2181	605aa	ENSDARP00000156555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000136226.3	spire2-203	2131	605aa	ENSDARP00000122584.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000012287.8	spire2-201	1314	339aa	ENSDARP00000006239.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,314 bps, Translation length: 339 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000012287.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000012287.8 spire2-201

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Transcript: ENSDART00000012287.8 spire2-201

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