Transcript: ENSDART00000011572.9 zgc:152891-201

Description

zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]

Location

About this transcript

This transcript has 15 exons, is annotated with 22 domains and features, is associated with 253 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011572.9	zgc:152891-201	2204	663aa	ENSDARP00000023401.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKM3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185356.1	zgc:152891-202	4997	663aa	ENSDARP00000146594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKM3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191637.1	zgc:152891-203	1862	611aa	ENSDARP00000144643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GSC9	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,204 bps, Translation length: 663 residues

Version

ENSDART00000011572.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.