Transcript: ENSDART00000011317.11 ntm-201

Description

neurotrimin [Source:ZFIN;Acc:ZDB-GENE-060421-6020]

Location

Chromosome 10: 29,963,518-30,576,089 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 27 domains and features, is associated with 10429 variant alleles and maps to 195 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000018065.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113912.4	ntm-203	1128	375aa	ENSDARP00000100022.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FH58	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000011317.11	ntm-201	1084	305aa	ENSDARP00000006040.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000099964.6	ntm-202	1022	317aa	ENSDARP00000090736.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000182990.1	ntm-205	1002	333aa	ENSDARP00000149816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZV58	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136398.2	ntm-204	432	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,084 bps, Translation length: 305 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000011317.11

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000011317.11 ntm-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000011317.11 ntm-201

Summary

About Us

Get help

Our sister sites

Follow us