Transcript: ENSDART00000011229.6 sub1b-201

Description

SUB1 regulator of transcription b [Source:ZFIN;Acc:ZDB-GENE-040718-209]

Gene Synonyms

rpo2tc1, sub1, zgc:92831

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 157 variant alleles and maps to 148 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011229.6	sub1b-201	871	124aa	ENSDARP00000025042.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGP6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175766.2	sub1b-202	2932	124aa	ENSDARP00000143329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGP6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 871 bps, Translation length: 124 residues

Version

ENSDART00000011229.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.