Transcript: ENSDART00000010975.9 PACC1-201

Description

proton activated chloride channel 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1173]

Location

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 409 variant alleles and maps to 183 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156002.3	PACC1-204	1783	351aa	ENSDARP00000129197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WG42	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000010975.9	PACC1-201	1795	298aa	ENSDARP00000021873.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000182647.1	PACC1-203	1284	298aa	ENSDARP00000149046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000141182.2	PACC1-202	791	181aa	ENSDARP00000115138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 1,795 bps, Translation length: 298 residues

Version

ENSDART00000010975.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.