Transcript: ENSDART00000010258.10 ndrg3b-201

Description

ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]

Gene Synonyms

fi05h10, wu:fi05h10

Location

Chromosome 23: 14,832,545-14,937,101 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 9 domains and features, is associated with 2473 variant alleles and maps to 279 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000010052.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000010258.10	ndrg3b-201	2350	371aa	ENSDARP00000007759.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q947	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179831.1	ndrg3b-209	5336	371aa	ENSDARP00000148335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q947	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147799.2	ndrg3b-208	600	148aa	ENSDARP00000116384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143553.3	ndrg3b-205	741	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138197.2	ndrg3b-203	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000139542.4	ndrg3b-204	499	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000134979.3	ndrg3b-202	878	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000147636.2	ndrg3b-207	801	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000144579.3	ndrg3b-206	724	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,350 bps, Translation length: 371 residues

Version

ENSDART00000010258.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000010258.10 ndrg3b-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000010258.10 ndrg3b-201

Summary

About Us

Get help

Our sister sites

Follow us