Transcript: ENSDART00000009952.9 zfand5a-201

Description

zinc finger, AN1-type domain 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1979]

Gene Synonyms

id:ibd2892, wu:fb16d02, wu:fc67h07, za20d2, zfand5, zgc:73363

Location

Chromosome 5: 25,680,852-25,694,359 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 16 domains and features, is associated with 344 variant alleles and maps to 203 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000018898.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009952.9	zfand5a-201	2000	213aa	ENSDARP00000019037.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBK7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000134773.2	zfand5a-203	2020	213aa	ENSDARP00000113136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBK7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000139701.3	zfand5a-204	2013	214aa	ENSDARP00000117816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BJ38	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000134242.2	zfand5a-202	656	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,000 bps, Translation length: 213 residues

Version

ENSDART00000009952.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000009952.9 zfand5a-201

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Transcript: ENSDART00000009952.9 zfand5a-201

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