Transcript: ENSDART00000009223.10 PDCD4-201

Description

programmed cell death 4b [Source:ZFIN;Acc:ZDB-GENE-030131-9847]

Location

About this transcript

This transcript has 12 exons, is annotated with 21 domains and features, is associated with 518 variant alleles and maps to 199 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009223.10	PDCD4-201	2155	470aa	ENSDARP00000002420.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8Y5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182173.1	PDCD4-202	5084	470aa	ENSDARP00000154195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8Y5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,155 bps, Translation length: 470 residues

Version

ENSDART00000009223.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.