Transcript: ENSDART00000009104.6 esrrga-201

Description

estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]

Gene Synonyms

ERRgamma, NR3B3, errg, esrrg

Location

About this transcript

This transcript has 9 exons, is annotated with 31 domains and features, is associated with 1737 variant alleles and maps to 257 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009104.6	esrrga-201	1991	501aa	ENSDARP00000005364.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PD98	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000166976.2	esrrga-202	1308	435aa	ENSDARP00000136509.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6Q6F4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,991 bps, Translation length: 501 residues

Version

ENSDART00000009104.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.