Transcript: ENSDART00000008898.8 foxm1-201

Description

forkhead box M1 [Source:ZFIN;Acc:ZDB-GENE-040426-1275]

Gene Synonyms

foxm1l, zgc:63854

Location

About this transcript

This transcript has 9 exons, is annotated with 23 domains and features, is associated with 432 variant alleles and maps to 242 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000008898.8	foxm1-201	3385	623aa	ENSDARP00000009248.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TQV3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166232.2	foxm1-204	745	167aa	ENSDARP00000139832.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000165354.2	foxm1-203	695	232aa	ENSDARP00000135852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000162390.2	foxm1-202	742	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,385 bps, Translation length: 623 residues

Version

ENSDART00000008898.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.