Transcript: ENSDART00000008554.5 larp7-201

Description

La ribonucleoprotein 7, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6896]

Gene Synonyms

fa10g04, wu:fa10g04, zgc:56476

Location

About this transcript

This transcript has 13 exons, is annotated with 33 domains and features, is associated with 65 variant alleles and maps to 144 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101731.5	larp7-202	5297	555aa	ENSDARP00000092507.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7F2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000008554.5	larp7-201	1982	555aa	ENSDARP00000013520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,982 bps, Translation length: 555 residues

Version

ENSDART00000008554.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.