Transcript: ENSDART00000007957.9 rps4x-201

Description

ribosomal protein S4 X-linked [Source:ZFIN;Acc:ZDB-GENE-040927-19]

Gene Synonyms

wu:fa91h09, zgc:92076

Location

About this transcript

This transcript has 6 exons, is associated with 242 variant alleles and maps to 140 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128917.3	rps4x-202	911	263aa	ENSDARP00000108089.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q642H9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133105.2	rps4x-203	733	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000007957.9	rps4x-201	909	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000174131.2	rps4x-204	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 909 bps,

Version

ENSDART00000007957.9

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.