Transcript: ENSDART00000007927.8 rbmx-201

Description

RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]

Gene Synonyms

fc66e11, wu:fb37c07, wu:fc66e11

Location

Chromosome 14: 31,858,930-31,862,673 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features, is associated with 234 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014244.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128730.4	rbmx-202	1560	379aa	ENSDARP00000111610.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZWA3-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186597.1	rbmx-208	1456	379aa	ENSDARP00000145351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZWA3-1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134748.3	rbmx-203	888	237aa	ENSDARP00000142485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000007927.8	rbmx-201	882	271aa	ENSDARP00000009865.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172870.2	rbmx-207	386	116aa	ENSDARP00000142604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138084.4	rbmx-204	1145	277aa	ENSDARP00000125065.2	Nonsense mediated decay	-	-
ENSDART00000144615.3	rbmx-206	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000139839.3	rbmx-205	1094	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 882 bps, Translation length: 271 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000007927.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000007927.8 rbmx-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000007927.8 rbmx-201

Summary

About Us

Get help

Our sister sites

Follow us